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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
733
total RNA-seq
6
WGBS
5
single cell RNA-seq
3
snDrop-seq
1
pCHi-C
Assay category
738
Transcription
6
DNA methylation
Date released
559
February, 2021
189
May, 2020
173
May, 2021
164
July, 2018
123
August, 2021
89
August, 2017
65
July, 2019
49
April, 2018
45
March, 2020
26
September, 2018
25
February, 2020
20
November, 2019
16
February, 2023
16
October, 2019
15
February, 2018
9
December, 2019
5
January, 2019
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
Available data
855
bam
811
bigWig
748
tsv
89
txt
58
tagAlign
50
bed narrowPeak
45
fastq
6
csv
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
748
Homo sapiens
Biosample type
595
tissue
79
cell line
52
primary cell
22
in vitro differentiated cells
Organ
449
connective tissue
386
adipose tissue
144
liver
58
bone element
52
artery
52
blood vessel
52
heart
52
vasculature
32
epithelium
32
pancreas
8
kidney
Project
697
AMP
45
T1D
6
HPAP
Genome assembly (visualization)
733
GRCh38
733
hg19
Lab
697
AMP-T2D consortium
45
Kyle Gaulton, UCSD
6
Klaus Kaestner, Upenn
Audit category:
48
inconsistent ontology term
5
audit script error
BIOSAMPLE
ASSAY
748 results
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Clear Filters
total RNA-seq
WGBS
single cell RNA-seq
snDrop-seq
pCHi-C
tissue
adipose tissue
381
liver
143
bone tissue
58
kidney
5
visceral abdominal adipose tissue
3
+ See 4 more…
cell line
smooth muscle cell of the coronary artery
52
EndoC_BH1
26
HepG2
1
primary cell
pancreatic alpha cell
6
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
+ See 22 more…
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
See all biosamples
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