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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
519
total RNA-seq
5
single cell RNA-seq
3
snDrop-seq
Assay category
524
Transcription
Date released
527
February, 2021
189
May, 2020
133
May, 2021
122
August, 2021
61
July, 2019
39
March, 2020
24
February, 2020
16
February, 2023
16
October, 2019
15
February, 2018
11
July, 2018
10
April, 2018
9
December, 2019
5
January, 2019
4
November, 2020
2
June, 2018
Available data
546
bam
527
tsv
525
bigWig
89
txt
39
fastq
23
bed narrowPeak
8
tagAlign
6
csv
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
527
Homo sapiens
Biosample type
452
tissue
52
cell line
22
in vitro differentiated cells
1
primary cell
Organ
449
connective tissue
386
adipose tissue
58
bone element
52
artery
52
blood vessel
52
heart
52
vasculature
32
epithelium
pancreas
8
kidney
Project
527
AMP
Genome assembly (visualization)
519
GRCh38
519
hg19
Lab
527
AMP-T2D consortium
Audit category:
18
inconsistent ontology term
5
audit script error
organ_slims!
pancreas
BIOSAMPLE
ASSAY
527 results
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total RNA-seq
single cell RNA-seq
snDrop-seq
tissue
adipose tissue
381
bone tissue
58
kidney
5
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
+ See 3 more…
cell line
smooth muscle cell of the coronary artery
52
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
primary cell
osteoblast
1
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