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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
545
total RNA-seq
84
RNA microarray
37
snATAC-seq
27
single cell RNA-seq
22
ATAC-seq
8
ChIP-seq
6
WGBS
3
snDrop-seq
2
pCHi-C
Assay category
22
DNA accessibility
6
DNA methylation
Date released
118
May, 2022
103
February, 2023
100
May, 2020
76
August, 2021
34
May, 2021
28
February, 2021
26
November, 2019
22
October, 2019
18
July, 2019
14
August, 2017
14
September, 2018
11
May, 2023
8
October, 2017
7
August, 2020
7
November, 2018
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
1
November, 2020
0
April, 2020
Available data
18
bam
18
bed narrowPeak
6
fastq
6
tsv
4
bed bedgraph
2
bed bed3
1
bigWig
Organism
28
Homo sapiens
Biosample type
9
cell line
8
tissue
7
primary cell
4
in vitro differentiated cells
Organ
8
artery
8
blood vessel
8
bone element
8
heart
8
skeleton
8
vasculature
6
epithelium
6
limb
6
pancreas
5
connective tissue
1
liver
Project
22
AMP
6
HPAP
Genome assembly (visualization)
22
hg19
18
GRCh38
Lab
22
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
1
inconsistent replicate
BIOSAMPLE
ASSAY
28 results
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Clear Filters
ATAC-seq
WGBS
cell line
smooth muscle cell of the coronary artery
8
HepG2
1
tissue
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
proximal epiphysis
1
+ See 3 more…
primary cell
pancreatic alpha cell
6
osteoblast
1
in vitro differentiated cells
adipocyte
4
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