Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ATAC-seq
49
total RNA-seq
13
single cell RNA-seq
6
snATAC-seq
3
snDrop-seq
2
STARR-seq
1
Hi-C
Assay category
70
DNA accessibility
62
Transcription
1
3D chromatin structure
Date released
130
August, 2021
81
June, 2019
47
September, 2023
30
October, 2019
23
April, 2019
14
May, 2023
11
July, 2019
8
February, 2021
5
May, 2019
3
December, 2019
2
March, 2020
0
October, 2018
Available data
64
bed narrowPeak
64
xls
62
txt
8
tsv
5
csv
1
hic
Organism
138
Homo sapiens
Biosample type
136
tissue
2
cell line
Organ
483
connective tissue
410
adipose tissue
158
heart
150
bone element
138
kidney
89
pancreas
72
blood vessel
72
vasculature
68
artery
40
epithelium
38
liver
8
embryo
8
skeleton
6
limb
Project
138
AMP
Genome assembly (visualization)
64
GRCh38
1
hg19
Lab
128
Katalin Susztak, Upenn
8
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
5
audit script error
BIOSAMPLE
ASSAY
138 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
single cell RNA-seq
snATAC-seq
snDrop-seq
STARR-seq
Hi-C
tissue
kidney
64
49
13
6
1
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
cell line
HEK293T
2
Download