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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
619
total RNA-seq
124
single cell RNA-seq
98
ATAC-seq
85
RNA microarray
51
ChIP-seq
33
snATAC-seq
6
Hi-C
6
WGBS
5
STARR-seq
4
Capture-C
3
snDrop-seq
2
pCHi-C
1
MPRA
1
whole genome sequencing assay
Assay category
6
3D chromatin structure
Date released
10
March, 2020
8
July, 2019
5
October, 2019
3
August, 2021
3
October, 2022
2
November, 2019
1
December, 2018
1
March, 2019
1
March, 2023
0
February, 2021
Available data
5
bedpe bed3+
5
hic
3
cool
Organism
6
Homo sapiens
Biosample type
3
primary cell
2
tissue
1
cell line
Organ
4
pancreas
3
epithelium
1
kidney
1
liver
Project
3
AMP
3
HPAP
Genome assembly (visualization)
5
hg19
Lab
3
Klaus Kaestner, Upenn
2
Bing Ren, UCSD
1
Katalin Susztak, Upenn
Audit category:
3
audit script error
BIOSAMPLE
ASSAY
6 results
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Hi-C
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
tissue
islet of Langerhans
1
kidney
1
cell line
HepG2
1
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