Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
27
snATAC-seq
18
single cell RNA-seq
11
ChIP-seq
6
WGBS
3
snDrop-seq
Assay category
27
DNA accessibility
18
Transcription
11
DNA binding
6
DNA methylation
Target of assay
11
control
Date released
259
August, 2021
161
May, 2022
160
February, 2023
141
February, 2021
135
August, 2017
125
November, 2017
97
October, 2019
83
May, 2021
81
May, 2020
59
September, 2020
47
September, 2023
32
March, 2020
31
June, 2019
29
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
December, 2017
17
July, 2019
17
November, 2018
16
January, 2021
15
April, 2019
14
May, 2023
10
November, 2020
10
October, 2017
8
February, 2018
7
August, 2020
5
December, 2018
5
December, 2019
5
January, 2018
5
March, 2023
4
January, 2019
4
July, 2018
4
September, 2017
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
October, 2022
1
September, 2018
Available data
89
txt
53
fastq
14
tsv
11
bam
6
csv
3
tagAlign
Organism
149
Homo sapiens
Biosample type
93
tissue
45
primary cell
8
in vitro differentiated cells
3
cell line
Organ
84
bone element
8
kidney
6
epithelium
6
pancreas
3
embryo
2
artery
2
blood vessel
2
heart
2
vasculature
1
liver
Project
104
AMP
45
HPAP
Genome assembly (visualization)
hg19
599
GRCh38
Lab
104
AMP-T2D consortium
45
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
32
audit script error
assembly!
hg19
BIOSAMPLE
ASSAY
149 results
search-icon
table-tab-icon
Clear Filters
RNA microarray
snATAC-seq
single cell RNA-seq
ChIP-seq
WGBS
snDrop-seq
tissue
bone element
84
kidney
5
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
+ See 1 more…
primary cell
Langerhans cell
27
12
pancreatic alpha cell
6
in vitro differentiated cells
pancreatic endoderm
3
definitive endodermal cell
1
embryonic stem cell
1
endocrine cell
1
posterior foregut
1
+ See 1 more…
cell line
smooth muscle cell of the coronary artery
2
iPSC derived cell line
1
See all biosamples
Download