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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
8
ChIP-seq
6
WGBS
3
snDrop-seq
2
pCHi-C
Assay category
Transcription
DNA accessibility
8
DNA binding
6
DNA methylation
Target of assay
5
transcription factor
3
control
Date released
406
November, 2017
311
August, 2017
251
October, 2019
183
May, 2021
120
May, 2019
103
February, 2021
94
December, 2017
80
April, 2019
77
November, 2018
74
October, 2018
57
August, 2021
51
May, 2020
45
March, 2020
41
May, 2022
40
May, 2024
35
December, 2018
35
July, 2019
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
November, 2019
15
October, 2017
10
November, 2020
6
February, 2023
6
September, 2017
5
January, 2018
4
October, 2022
2
December, 2019
1
August, 2018
1
March, 2019
1
March, 2023
0
February, 2020
Available data
84
txt
9
bam
9
tsv
8
tagAlign
6
fastq
5
bed narrowPeak
5
bigWig
2
bed bed3+
Organism
103
Homo sapiens
Biosample type
87
tissue
9
cell line
7
primary cell
Organ
84
bone element
6
artery
6
blood vessel
6
epithelium
6
heart
6
pancreas
6
vasculature
3
kidney
1
connective tissue
1
liver
Project
97
AMP
6
HPAP
Genome assembly (visualization)
7
hg19
5
GRCh38
Lab
97
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
assay_slims!
Transcription
DNA accessibility
BIOSAMPLE
ASSAY
103 results
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Clear Filters
RNA microarray
ChIP-seq
WGBS
snDrop-seq
pCHi-C
tissue
bone element
84
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
cell line
smooth muscle cell of the coronary artery
6
iPSC derived cell line
2
HepG2
1
primary cell
pancreatic alpha cell
6
osteoblast
1
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