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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
total RNA-seq
9
ATAC-seq
6
ChIP-seq
1
pCHi-C
1
single cell RNA-seq
Assay category
56
Transcription
9
DNA accessibility
6
DNA binding
Target of assay
4
transcription factor
2
control
Date released
315
November, 2017
194
May, 2020
69
February, 2021
63
December, 2017
54
August, 2017
53
November, 2018
40
May, 2022
37
August, 2021
35
February, 2023
33
October, 2019
13
July, 2019
5
December, 2019
5
January, 2019
5
May, 2019
4
June, 2019
3
February, 2020
3
March, 2020
1
December, 2018
Available data
67
bam
56
bigWig
55
tsv
13
bed narrowPeak
6
tagAlign
1
bed bed3
1
bed bed3+
1
csv
Organism
72
Homo sapiens
Biosample type
68
cell line
4
tissue
Organ
457
connective tissue
388
adipose tissue
150
bone element
69
blood vessel
69
heart
69
vasculature
68
artery
33
pancreas
32
epithelium
12
brain
9
limb
8
kidney
8
skeleton
4
liver
2
musculature of body
1
eye
1
nerve
1
spinal cord
Project
72
AMP
Genome assembly (visualization)
66
hg19
65
GRCh38
Lab
72
AMP-T2D consortium
Audit category:
1
inconsistent replicate
BIOSAMPLE
ASSAY
72 results
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total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
8
6
HepG2
1
1
tissue
coronary artery
1
liver
1
right lobe of liver
1
tibial artery
1
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