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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
total RNA-seq
29
snATAC-seq
12
single cell RNA-seq
11
ATAC-seq
6
WGBS
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
Assay category
93
Transcription
40
DNA accessibility
6
DNA methylation
Date released
153
May, 2021
134
May, 2022
99
February, 2023
59
September, 2020
47
September, 2023
45
February, 2021
45
May, 2020
19
April, 2020
16
January, 2021
7
August, 2020
7
March, 2020
5
March, 2023
3
October, 2022
Available data
121
fastq
6
tsv
Organism
144
Homo sapiens
Biosample type
121
primary cell
18
tissue
5
cell line
Organ
61
pancreas
43
epithelium
Project
AMP
121
HPAP
23
T1D
Lab
121
Klaus Kaestner, Upenn
23
Kyle Gaulton, UCSD
Audit category:
27
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award.project!
AMP
BIOSAMPLE
ASSAY
144 results
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total RNA-seq
snATAC-seq
single cell RNA-seq
ATAC-seq
WGBS
CRISPR genome editing followed by DNA sequencing
HiChIP
primary cell
Langerhans cell
27
12
exocrine cell
39
pancreatic alpha cell
27
6
pancreatic beta cell
10
tissue
islet of Langerhans
5
2
11
cell line
EndoC_BH1
3
2
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