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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
total RNA-seq
12
ATAC-seq
6
WGBS
1
CRISPR genome editing followed by sgRNA sequencing
Assay category
65
Transcription
12
DNA accessibility
6
DNA methylation
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
43
fastq
34
tsv
26
bam
26
bigWig
12
bed narrowPeak
Organism
83
Homo sapiens
Biosample type
43
primary cell
27
cell line
14
tissue
Organ
469
connective tissue
387
adipose tissue
158
bone element
102
heart
101
artery
101
blood vessel
101
vasculature
88
pancreas
84
epithelium
31
eye
16
skeleton
8
kidney
6
limb
3
liver
1
brain
Project
43
HPAP
41
AMP
Genome assembly (visualization)
38
hg19
26
GRCh38
Lab
43
Klaus Kaestner, Upenn
41
AMP-T2D consortium
Audit category:
26
inconsistent ontology term
BIOSAMPLE
ASSAY
84 results
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Clear Filters
total RNA-seq
ATAC-seq
WGBS
CRISPR genome editing followed by sgRNA sequencing
primary cell
pancreatic alpha cell
27
6
pancreatic beta cell
10
cell line
EndoC_BH1
26
1
tissue
pigmented layer of retina
2
12
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