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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
451
total RNA-seq
13
ATAC-seq
6
WGBS
1
CRISPR genome editing followed by sgRNA sequencing
Assay category
451
Transcription
13
DNA accessibility
6
DNA methylation
Date released
418
February, 2021
86
August, 2017
80
May, 2022
61
September, 2018
53
February, 2023
36
October, 2019
33
April, 2018
33
July, 2018
26
May, 2021
25
July, 2019
25
October, 2018
21
June, 2019
19
December, 2017
19
September, 2020
17
November, 2019
7
August, 2020
7
August, 2021
7
March, 2020
6
December, 2019
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
4
August, 2018
3
October, 2022
2
February, 2020
1
January, 2018
1
June, 2018
1
May, 2023
1
November, 2018
1
October, 2017
Available data
420
tsv
412
bam
412
bigWig
43
fastq
13
bed narrowPeak
Organism
470
Homo sapiens
Biosample type
401
tissue
43
primary cell
27
cell line
Organ
469
connective tissue
387
adipose tissue
158
bone element
102
heart
101
artery
101
blood vessel
101
vasculature
88
pancreas
84
epithelium
31
eye
16
skeleton
8
kidney
6
limb
3
liver
1
brain
Project
428
AMP
43
HPAP
Genome assembly (visualization)
425
hg19
412
GRCh38
Lab
428
AMP-T2D consortium
43
Klaus Kaestner, Upenn
Audit category:
26
inconsistent ontology term
BIOSAMPLE
ASSAY
471 results
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Clear Filters
total RNA-seq
ATAC-seq
WGBS
CRISPR genome editing followed by sgRNA sequencing
tissue
adipose tissue
381
1
pigmented layer of retina
2
12
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
primary cell
pancreatic alpha cell
27
6
pancreatic beta cell
10
cell line
EndoC_BH1
26
1
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