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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
575
total RNA-seq
84
RNA microarray
35
ChIP-seq
34
pCHi-C
27
snATAC-seq
26
ATAC-seq
18
single cell RNA-seq
10
Hi-C
6
WGBS
3
snDrop-seq
Assay category
35
DNA binding
Target of assay
19
histone
19
histone modification
11
control
11
narrow histone mark
8
broad histone mark
5
transcription factor
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
35
bam
24
bed narrowPeak
24
bigWig
24
fastq
8
tagAlign
Organism
35
Homo sapiens
Biosample type
24
in vitro differentiated cells
9
cell line
2
tissue
Organ
9
embryo
6
artery
6
blood vessel
6
heart
6
vasculature
3
pancreas
1
epithelium
Project
32
AMP
3
T1D
Genome assembly (visualization)
24
GRCh38
24
hg19
Lab
35
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
35 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
pancreatic endoderm
9
definitive endodermal cell
3
embryonic stem cell
3
endocrine cell
3
posterior foregut
3
+ See 1 more…
cell line
smooth muscle cell of the coronary artery
6
iPSC derived cell line
2
EndoC_BH1
1
tissue
islet of Langerhans
2
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