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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
total RNA-seq
27
snATAC-seq
12
single cell RNA-seq
6
WGBS
Assay category
57
Transcription
27
DNA accessibility
6
DNA methylation
Date released
153
May, 2021
134
May, 2022
99
February, 2023
59
September, 2020
47
September, 2023
45
February, 2021
45
May, 2020
19
April, 2020
16
January, 2021
7
August, 2020
7
March, 2020
5
March, 2023
3
October, 2022
Available data
51
tsv
45
bam
45
bigWig
45
fastq
Organism
90
Homo sapiens
Biosample type
90
primary cell
Organ
6
epithelium
6
pancreas
Project
AMP
45
HPAP
45
T1D
Genome assembly (visualization)
45
GRCh38
45
hg19
Lab
45
Klaus Kaestner, Upenn
45
Kyle Gaulton, UCSD
Audit category:
27
audit script error
4
inconsistent ontology term
target.investigated_as!
transcription factor
award.project!
AMP
BIOSAMPLE
ASSAY
90 results
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total RNA-seq
snATAC-seq
single cell RNA-seq
WGBS
primary cell
Langerhans cell
27
12
pancreatic alpha cell
6
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
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