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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
ChIP-seq
2
ATAC-seq
1
pCHi-C
1
single cell RNA-seq
1
total RNA-seq
Assay category
5
DNA binding
2
DNA accessibility
2
Transcription
Target of assay
5
histone
5
histone modification
3
broad histone mark
2
narrow histone mark
Date released
315
November, 2017
194
May, 2020
63
December, 2017
54
August, 2017
53
November, 2018
40
May, 2022
35
August, 2021
10
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
3
February, 2021
3
March, 2020
2
June, 2019
1
December, 2018
1
February, 2020
Available data
8
bam
7
bed narrowPeak
6
bigWig
1
bed bed3
1
bed bed3+
1
csv
1
tsv
Organism
10
Homo sapiens
Biosample type
7
tissue
2
cell line
1
primary cell
Organ
459
connective tissue
387
adipose tissue
150
bone element
113
blood vessel
113
vasculature
92
artery
86
brain
75
limb
74
heart
67
epithelium
50
pancreas
42
nerve
38
kidney
21
eye
21
vein
10
liver
8
skeleton
4
gonad
4
ovary
2
pituitary gland
1
lymph node
1
skin of body
Project
10
AMP
Genome assembly (visualization)
9
hg19
8
GRCh38
Lab
10
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
month_released!
January, 2021
BIOSAMPLE
ASSAY
10 results
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ChIP-seq
ATAC-seq
pCHi-C
single cell RNA-seq
total RNA-seq
tissue
liver
5
1
1
cell line
HepG2
1
1
primary cell
Liver fetal (hepatocyte)
1
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