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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
27
snATAC-seq
18
single cell RNA-seq
4
ATAC-seq
3
snDrop-seq
1
pCHi-C
Assay category
31
DNA accessibility
18
Transcription
Date released
268
August, 2021
153
February, 2023
137
February, 2021
129
August, 2017
106
May, 2021
96
May, 2022
61
October, 2019
58
May, 2020
47
September, 2023
45
March, 2020
40
September, 2020
25
February, 2020
19
April, 2020
18
July, 2019
16
January, 2021
15
May, 2023
14
November, 2017
8
January, 2018
8
October, 2017
5
March, 2023
4
December, 2019
4
July, 2018
4
March, 2019
4
November, 2020
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
November, 2019
1
October, 2022
1
September, 2018
Available data
bam
527
tsv
525
bigWig
89
txt
39
fastq
23
bed narrowPeak
8
tagAlign
6
csv
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
137
Homo sapiens
Biosample type
93
tissue
39
primary cell
4
in vitro differentiated cells
1
cell line
Organ
84
bone element
8
kidney
epithelium
6
pancreas
4
connective tissue
2
liver
Project
98
AMP
39
HPAP
Genome assembly (visualization)
5
hg19
Lab
98
AMP-T2D consortium
39
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
32
audit script error
organ_slims!
epithelium
files.file_type!
bam
BIOSAMPLE
ASSAY
137 results
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Clear Filters
RNA microarray
snATAC-seq
single cell RNA-seq
ATAC-seq
snDrop-seq
pCHi-C
tissue
bone element
84
kidney
5
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
+ See 1 more…
primary cell
Langerhans cell
27
12
in vitro differentiated cells
adipocyte
4
cell line
HepG2
1
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