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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
475
total RNA-seq
6
WGBS
5
ATAC-seq
1
pCHi-C
Assay category
475
Transcription
6
DNA methylation
5
DNA accessibility
Date released
487
February, 2021
313
August, 2017
157
July, 2018
104
May, 2022
76
October, 2018
72
September, 2018
70
February, 2023
63
May, 2021
56
November, 2019
39
April, 2018
24
July, 2019
22
June, 2019
22
October, 2019
19
September, 2020
16
March, 2020
16
November, 2020
11
September, 2017
9
August, 2021
8
January, 2021
8
November, 2018
7
August, 2020
6
October, 2017
5
March, 2019
4
August, 2018
3
February, 2020
3
October, 2022
2
May, 2019
1
August, 2022
1
January, 2018
1
June, 2018
1
May, 2023
Available data
481
tsv
477
bam
476
bigWig
6
fastq
4
bed bedgraph
1
bed bed3
1
bed bed3+
1
bed narrowPeak
Organism
487
Homo sapiens
Biosample type
444
tissue
26
cell line
9
primary cell
8
in vitro differentiated cells
Organ
455
connective tissue
386
adipose tissue
150
bone element
66
artery
66
blood vessel
66
heart
66
vasculature
32
epithelium
32
pancreas
8
kidney
8
skeleton
6
limb
3
liver
Project
481
AMP
6
HPAP
Genome assembly (visualization)
481
hg19
476
GRCh38
Lab
481
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
26
inconsistent ontology term
BIOSAMPLE
ASSAY
487 results
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Clear Filters
total RNA-seq
WGBS
ATAC-seq
pCHi-C
tissue
adipose tissue
381
bone tissue
58
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
cell line
EndoC_BH1
26
primary cell
pancreatic alpha cell
6
osteoblast
1
1
1
in vitro differentiated cells
adipocyte
4
4
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