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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ATAC-seq
4
GRO-seq
2
Hi-C
2
total RNA-seq
Assay category
4
DNA accessibility
2
3D chromatin structure
2
Transcription
Date released
132
May, 2021
68
August, 2017
43
December, 2017
42
August, 2021
39
February, 2018
26
February, 2021
16
February, 2023
8
March, 2020
8
October, 2019
5
November, 2019
4
January, 2018
2
December, 2019
1
August, 2018
Available data
8
bigWig
4
bam
4
fastq
2
bed narrowPeak
2
bedpe bed3+
2
bigBed narrowPeak
2
hic
2
tsv
Organism
12
Homo sapiens
Biosample type
244
tissue
34
primary cell
31
cell line
12
in vitro differentiated cells
1
stem cell
Organ
2
connective tissue
1
embryo
Project
12
AMP
Genome assembly (visualization)
8
hg19
4
GRCh38
4
hg18
Lab
12
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
12 results
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ATAC-seq
GRO-seq
Hi-C
total RNA-seq
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
1
1
1
cardiomyocytes (cardiac muscle cell)
1
1
1
adipocyte
2
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
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