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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
7
WGBS
5
GRO-seq
1
single cell RNA-seq
Assay category
70
DNA binding
DNA accessibility
7
DNA methylation
1
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
666
February, 2021
406
November, 2017
400
August, 2017
365
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
83
fastq
77
bam
75
bigWig
63
bed narrowPeak
63
bigBed narrowPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
83
Homo sapiens
Biosample type
61
cell line
16
tissue
4
in vitro differentiated cells
1
primary cell
1
stem cell
Organ
50
liver
15
blood
15
bodily fluid
8
spleen
4
pancreas
1
embryo
Project
83
AMP
Genome assembly (visualization)
70
GRCh38
61
hg19
5
hg18
Lab
83
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
83 results
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Clear Filters
ChIP-seq
WGBS
GRO-seq
single cell RNA-seq
cell line
HepG2
45
1
GM12878
15
tissue
spleen
6
2
liver
4
body of pancreas
2
pancreas
2
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
primary cell
pancreatic cell
1
stem cell
hESC
1
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