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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
397
ChIP-seq
5
GRO-seq
3
ATAC-seq
Assay category
397
DNA binding
3
DNA accessibility
Target of assay
241
transcription factor
85
histone
85
histone modification
68
control
66
recombinant protein
50
broad histone mark
35
narrow histone mark
34
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
667
February, 2021
397
November, 2017
352
August, 2017
315
August, 2021
280
October, 2019
194
May, 2020
193
May, 2021
163
June, 2019
120
July, 2018
117
February, 2023
115
May, 2019
94
December, 2017
87
November, 2018
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
63
March, 2020
61
November, 2019
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
10
November, 2020
8
January, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
383
bam
333
bigWig
320
fastq
307
bed narrowPeak
306
bigBed narrowPeak
78
tagAlign
64
bed broadPeak
58
bigBed broadPeak
3
tar
Organism
405
Homo sapiens
Biosample type
316
cell line
84
tissue
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
315
liver
82
brain
1
adipose tissue
1
blood
1
bodily fluid
1
connective tissue
1
embryo
1
musculature of body
Project
405
AMP
Genome assembly (visualization)
275
hg19
274
GRCh38
5
hg18
Lab
405
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
biosample_type!
primary cell
BIOSAMPLE
ASSAY
405 results
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Clear Filters
ChIP-seq
GRO-seq
ATAC-seq
cell line
HepG2
315
GM12878
1
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
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in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
stem cell
hESC
1
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