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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
ChIP-seq
5
total RNA-seq
Assay category
98
DNA binding
5
Transcription
Target of assay
56
transcription factor
37
histone
37
histone modification
19
broad histone mark
18
narrow histone mark
10
RNA binding protein
9
chromatin remodeller
5
control
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
103
bam
103
fastq
98
bigWig
93
bed narrowPeak
71
bigBed narrowPeak
15
bed bed3+
5
tsv
Organism
103
Homo sapiens
Biosample type
42
tissue
38
in vitro differentiated cells
20
cell line
3
stem cell
Organ
55
liver
16
epithelium
15
blood
15
bodily fluid
9
embryo
6
spleen
Project
103
AMP
Genome assembly (visualization)
103
GRCh38
103
hg19
Lab
103
AMP-T2D consortium
Audit category:
27
inconsistent control
2
inconsistent ontology term
Audit category:
11
inconsistent control read length
BIOSAMPLE
ASSAY
103 results
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Clear Filters
ChIP-seq
total RNA-seq
tissue
liver
29
right lobe of liver
7
spleen
6
in vitro differentiated cells
hepatocyte
14
pancreatic endoderm
7
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
cell line
GM12878
15
HepG2
5
stem cell
hESC
3
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