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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
417
ChIP-seq
5
total RNA-seq
Assay category
417
DNA binding
5
Transcription
Target of assay
257
transcription factor
82
histone
82
histone modification
75
control
66
recombinant protein
50
broad histone mark
43
RNA binding protein
32
narrow histone mark
21
chromatin remodeller
2
other context
2
other post-translational modification
Date released
572
February, 2021
392
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
250
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
422
bam
360
bigWig
354
fastq
334
bed narrowPeak
333
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
5
tsv
3
tar
Organism
422
Homo sapiens
Biosample type
337
cell line
76
tissue
9
primary cell
Organ
319
liver
78
brain
18
blood
18
bodily fluid
7
spleen
6
epithelium
6
vasculature
3
blood vessel
Project
422
AMP
Genome assembly (visualization)
306
GRCh38
306
hg19
Lab
422
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
month_released!
February, 2018
BIOSAMPLE
ASSAY
422 results
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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG2
314
5
GM12878
18
tissue
layer of hippocampus
19
caudate nucleus
14
middle frontal area 46
13
substantia nigra
13
cingulate gyrus
8
+ See 2 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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