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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
12
single cell RNA-seq
11
ATAC-seq
10
snATAC-seq
6
total RNA-seq
Assay category
25
DNA binding
21
DNA accessibility
18
Transcription
Target of assay
14
transcription factor
7
histone
7
histone modification
6
RNA binding protein
6
chromatin remodeller
4
broad histone mark
4
control
3
narrow histone mark
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
30
bam
30
fastq
26
bigWig
21
bed narrowPeak
21
bigBed narrowPeak
5
tsv
Organism
63
Homo sapiens
Biosample type
41
tissue
23
cell line
Organ
19
lung
18
blood
18
bodily fluid
14
kidney
7
spleen
5
liver
1
adipose tissue
1
connective tissue
Project
45
AMP
19
LungMap
Genome assembly (visualization)
38
GRCh38
27
hg19
Lab
31
AMP-T2D consortium
19
Xin Sun, UCSD
14
Katalin Susztak, Upenn
BIOSAMPLE
ASSAY
64 results
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Clear Filters
ChIP-seq
single cell RNA-seq
ATAC-seq
snATAC-seq
total RNA-seq
tissue
lung
9
10
kidney
3
11
spleen
7
adipose tissue
1
cell line
GM12878
18
HepG2
5
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