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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
113
ChIP-seq
Assay category
113
DNA binding
Target of assay
205
histone modification
204
histone
113
broad histone mark
90
narrow histone mark
61
transcription factor
54
control
14
RNA binding protein
9
chromatin remodeller
Date released
109
August, 2017
76
May, 2021
58
May, 2019
55
October, 2019
50
November, 2017
37
April, 2019
20
May, 2024
19
October, 2018
17
September, 2018
15
December, 2017
10
October, 2017
9
August, 2021
8
February, 2018
8
June, 2019
6
November, 2019
4
January, 2019
Available data
65
bigWig
60
bed narrowPeak
53
bam
53
fastq
45
tagAlign
22
bed broadPeak
22
bigBed narrowPeak
6
bed bed3+
6
bigBed broadPeak
Organism
109
Homo sapiens
Biosample type
77
tissue
20
in vitro differentiated cells
16
primary cell
Organ
40
connective tissue
32
pancreas
20
adipose tissue
19
liver
12
musculature of body
6
epithelium
4
spleen
Project
113
AMP
Genome assembly (visualization)
65
hg19
53
GRCh38
Lab
113
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
3
inconsistent control read length
2
inconsistent assembly
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
113 results
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Clear Filters
ChIP-seq
tissue
subcutaneous abdominal adipose tissue
20
liver
19
islet of Langerhans
14
skeletal muscle tissue
12
pancreas
8
+ See 1 more…
in vitro differentiated cells
adipocyte
20
primary cell
skeletal muscle myoblast
6
pancreatic endocrine cell
4
pancreatic alpha cell
3
pancreatic beta cell
3
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