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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
total RNA-seq
56
ChIP-seq
1
DNase-seq
1
FAIRE-seq
Assay category
89
Transcription
56
DNA binding
2
DNA accessibility
Target of assay
40
histone
40
histone modification
22
broad histone mark
18
narrow histone mark
9
control
7
transcription factor
2
RNA binding protein
Date released
147
August, 2017
120
July, 2018
61
May, 2021
55
November, 2019
51
October, 2018
26
February, 2021
24
May, 2022
19
February, 2023
18
October, 2019
14
March, 2020
10
November, 2020
8
January, 2021
7
November, 2018
6
April, 2018
6
July, 2019
6
September, 2017
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
2
May, 2019
1
August, 2022
1
February, 2020
0
January, 2019
Available data
130
bigWig
127
bam
127
fastq
89
tsv
32
bed narrowPeak
19
bed bed3+
16
tagAlign
14
bigBed narrowPeak
12
bed broadPeak
Organism
140
Homo sapiens
Biosample type
147
tissue
primary cell
Organ
147
pancreas
125
connective tissue
59
liver
57
adipose tissue
26
musculature of body
18
blood
18
bodily fluid
7
spleen
Project
147
AMP
Genome assembly (visualization)
130
hg19
123
GRCh38
Lab
147
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
4
inconsistent control read length
1
inconsistent assembly
biosample_type!
primary cell
BIOSAMPLE
ASSAY
147 results
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Clear Filters
total RNA-seq
ChIP-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
89
42
1
1
pancreas
14
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