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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
153
ChIP-seq
5
ATAC-seq
4
DNase-seq
1
FAIRE-seq
Assay category
153
DNA binding
10
DNA accessibility
Target of assay
115
histone modification
114
histone
60
broad histone mark
53
narrow histone mark
38
transcription factor
13
RNA binding protein
9
chromatin remodeller
Date released
313
November, 2017
210
June, 2019
189
October, 2019
142
August, 2017
133
May, 2021
106
August, 2021
97
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
65
February, 2023
46
September, 2018
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
0
August, 2020
Available data
324
fastq
312
bam
305
bigWig
163
bed narrowPeak
94
tsv
85
tagAlign
63
bigBed narrowPeak
41
bed broadPeak
33
bed bed3+
15
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
157
Homo sapiens
Biosample type
72
tissue
43
in vitro differentiated cells
33
primary cell
15
cell line
Organ
49
pancreas
46
connective tissue
18
liver
17
epithelium
15
blood
15
bodily fluid
13
musculature of body
6
spleen
3
adipose tissue
Project
163
AMP
Genome assembly (visualization)
163
hg19
139
GRCh38
Lab
163
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
16
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
BIOSAMPLE
ASSAY
163 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
18
1
1
liver
17
skeletal muscle tissue
13
pancreas
12
spleen
6
+ See 4 more…
in vitro differentiated cells
adipocyte
42
1
primary cell
skeletal muscle myoblast
14
2
pancreatic alpha cell
7
1
pancreatic beta cell
7
1
pancreatic acinar cell
1
cell line
GM12878
15
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