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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ATAC-seq
51
ChIP-seq
Assay category
76
DNA accessibility
51
DNA binding
Target of assay
26
histone
26
histone modification
25
transcription factor
14
narrow histone mark
12
broad histone mark
7
RNA binding protein
6
chromatin remodeller
Date released
313
November, 2017
210
June, 2019
189
October, 2019
142
August, 2017
133
May, 2021
106
August, 2021
97
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
65
February, 2023
46
September, 2018
45
October, 2018
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
128
tsv
127
bed narrowPeak
79
bam
73
bigWig
64
xls
57
txt
30
fastq
24
tagAlign
21
bigBed narrowPeak
5
bed bed3+
2
bedpe bed3+
2
hic
1
vcf
Organism
127
Homo sapiens
Biosample type
70
tissue
29
cell line
25
in vitro differentiated cells
3
primary cell
Organ
64
kidney
17
liver
15
blood
15
bodily fluid
6
spleen
3
epithelium
2
connective tissue
Project
127
AMP
Genome assembly (visualization)
111
GRCh38
62
hg19
Lab
64
Katalin Susztak, Upenn
47
AMP-T2D consortium
14
Bing Ren, UCSD
2
Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY
127 results
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Clear Filters
ATAC-seq
ChIP-seq
tissue
kidney
64
spleen
6
cell line
GM12878
15
HepG2
14
in vitro differentiated cells
neural progenitor cell
10
13
adipocyte
1
osteoblast
1
primary cell
hepatocyte
3
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