Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
115
ChIP-seq
5
total RNA-seq
Assay category
115
DNA binding
5
Transcription
Target of assay
56
transcription factor
36
histone
36
histone modification
23
control
19
broad histone mark
17
narrow histone mark
10
RNA binding protein
9
chromatin remodeller
Date released
587
February, 2021
411
August, 2017
406
November, 2017
333
May, 2020
316
August, 2021
309
May, 2021
291
October, 2019
200
May, 2022
194
February, 2023
192
June, 2019
162
July, 2018
117
May, 2019
106
July, 2019
90
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
49
April, 2018
47
March, 2020
47
September, 2023
39
February, 2018
39
November, 2019
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
November, 2020
8
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
2
June, 2018
1
August, 2022
Available data
120
bam
120
fastq
96
bigWig
91
bed narrowPeak
71
bigBed narrowPeak
15
bed bed3+
5
tsv
Organism
120
Homo sapiens
Biosample type
55
tissue
39
in vitro differentiated cells
23
cell line
3
stem cell
Organ
68
liver
18
blood
18
bodily fluid
15
epithelium
9
embryo
7
spleen
Project
120
AMP
Genome assembly (visualization)
101
GRCh38
101
hg19
Lab
120
AMP-T2D consortium
Audit category:
27
inconsistent control
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
10
inconsistent control read length
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
120 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
tissue
liver
38
right lobe of liver
10
spleen
7
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
cell line
GM12878
18
HepG2
5
stem cell
hESC
3
Download