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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
ChIP-seq
25
total RNA-seq
3
single cell RNA-seq
2
RNA microarray
Assay category
49
DNA binding
28
Transcription
Target of assay
23
histone
23
histone modification
14
transcription factor
12
broad histone mark
12
control
11
narrow histone mark
6
RNA binding protein
6
chromatin remodeller
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
74
bam
69
fastq
62
bigWig
37
bed narrowPeak
29
tsv
21
bigBed narrowPeak
Organism
79
Homo sapiens
Biosample type
41
in vitro differentiated cells
23
cell line
10
tissue
5
primary cell
Organ
18
blood
18
bodily fluid
13
embryo
10
liver
7
spleen
6
epithelium
3
kidney
Project
79
AMP
Genome assembly (visualization)
62
GRCh38
62
hg19
Lab
79
AMP-T2D consortium
Audit category:
4
audit script error
2
inconsistent ontology term
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
79 results
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Clear Filters
ChIP-seq
total RNA-seq
single cell RNA-seq
RNA microarray
in vitro differentiated cells
pancreatic endoderm
9
4
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
posterior foregut
3
2
+ See 3 more…
cell line
GM12878
18
HepG2
5
tissue
spleen
7
kidney
1
kidney interstitium
1
renal glomerulus
1
primary cell
hepatocyte
5
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