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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
snATAC-seq
25
ChIP-seq
12
single cell RNA-seq
6
WGBS
5
total RNA-seq
Assay category
27
DNA accessibility
25
DNA binding
17
Transcription
6
DNA methylation
Target of assay
14
transcription factor
7
histone
7
histone modification
6
RNA binding protein
6
chromatin remodeller
4
broad histone mark
4
control
3
narrow histone mark
Date released
324
November, 2017
287
August, 2017
94
December, 2017
88
November, 2018
76
February, 2023
73
September, 2018
60
October, 2018
50
July, 2018
45
February, 2021
44
April, 2018
41
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
May, 2022
17
October, 2017
11
September, 2017
7
August, 2020
5
January, 2018
4
August, 2018
3
June, 2018
1
March, 2019
Available data
602
bam
577
bigWig
564
tsv
89
txt
75
fastq
44
bed narrowPeak
21
bigBed narrowPeak
8
tagAlign
6
csv
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
75
Homo sapiens
Biosample type
45
primary cell
23
cell line
7
tissue
Organ
18
blood
18
bodily fluid
7
spleen
6
epithelium
6
pancreas
5
liver
Project
45
HPAP
30
AMP
Genome assembly (visualization)
26
GRCh38
26
hg19
Lab
45
Klaus Kaestner, Upenn
30
AMP-T2D consortium
Audit category:
27
audit script error
BIOSAMPLE
ASSAY
75 results
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Clear Filters
snATAC-seq
ChIP-seq
single cell RNA-seq
WGBS
total RNA-seq
primary cell
Langerhans cell
27
12
pancreatic alpha cell
6
cell line
GM12878
18
HepG2
5
tissue
spleen
7
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