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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
125
total RNA-seq
56
ChIP-seq
48
single cell RNA-seq
Assay category
173
Transcription
56
DNA binding
Target of assay
26
histone
26
histone modification
18
transcription factor
14
narrow histone mark
12
broad histone mark
12
control
10
RNA binding protein
6
chromatin remodeller
Date released
713
February, 2021
406
November, 2017
397
May, 2021
378
August, 2017
341
May, 2020
314
August, 2021
306
October, 2019
201
February, 2023
199
May, 2022
168
July, 2018
120
May, 2019
104
July, 2019
80
April, 2019
79
December, 2017
79
November, 2018
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
10
December, 2019
9
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
412
bam
400
bigWig
231
bed narrowPeak
231
bigBed narrowPeak
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
169
tsv
80
fastq
Organism
229
Homo sapiens
Biosample type
127
tissue
79
primary cell
23
cell line
Organ
157
pancreas
39
epithelium
18
blood
18
bodily fluid
14
connective tissue
10
musculature of body
7
spleen
5
heart
5
liver
3
eye
3
kidney
Project
229
AMP
Genome assembly (visualization)
213
GRCh38
213
hg19
Lab
229
AMP-T2D consortium
Audit category:
28
inconsistent ontology term
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
229 results
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Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
tissue
islet of Langerhans
120
spleen
7
primary cell
pancreatic beta cell
9
skeletal muscle satellite cell
8
mesenchymal stem cell
7
pancreatic alpha cell
7
cardiac fibroblast
5
+ See 17 more…
cell line
GM12878
18
HepG2
5
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