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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
single cell RNA-seq
25
ChIP-seq
7
total RNA-seq
Assay category
55
Transcription
25
DNA binding
Target of assay
14
transcription factor
7
histone
7
histone modification
6
RNA binding protein
6
chromatin remodeller
4
broad histone mark
4
control
3
narrow histone mark
Date released
324
November, 2017
287
August, 2017
94
December, 2017
88
November, 2018
76
February, 2023
73
September, 2018
60
October, 2018
50
July, 2018
45
February, 2021
44
April, 2018
41
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
May, 2022
17
October, 2017
11
September, 2017
7
August, 2020
5
January, 2018
4
August, 2018
3
June, 2018
1
March, 2019
0
June, 2019
Available data
412
bam
400
bigWig
231
bed narrowPeak
231
bigBed narrowPeak
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
169
tsv
80
fastq
Organism
80
Homo sapiens
Biosample type
48
primary cell
23
cell line
9
tissue
Organ
39
pancreas
33
epithelium
18
blood
18
bodily fluid
7
spleen
5
liver
2
connective tissue
Project
80
AMP
Genome assembly (visualization)
76
GRCh38
76
hg19
Lab
80
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
80 results
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single cell RNA-seq
ChIP-seq
total RNA-seq
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
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cell line
GM12878
18
HepG2
5
tissue
spleen
7
islet of Langerhans
2
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