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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
157
DNase-seq
125
total RNA-seq
51
ChIP-seq
48
single cell RNA-seq
Assay category
173
Transcription
157
DNA accessibility
51
DNA binding
Target of assay
24
histone
24
histone modification
17
transcription factor
12
broad histone mark
12
narrow histone mark
10
control
9
RNA binding protein
6
chromatin remodeller
Date released
649
February, 2021
411
August, 2017
406
November, 2017
396
May, 2021
341
May, 2020
306
October, 2019
227
August, 2021
200
May, 2022
183
June, 2019
169
February, 2023
168
July, 2018
99
May, 2019
94
December, 2017
88
November, 2018
83
July, 2019
76
October, 2018
73
September, 2018
61
November, 2019
59
September, 2020
57
March, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
23
April, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
377
bam
367
bigWig
198
bed narrowPeak
198
bigBed narrowPeak
169
tsv
157
bed bed3+
157
bed broadPeak
157
bigBed broadPeak
80
fastq
Organism
381
Homo sapiens
Biosample type
263
tissue
95
primary cell
23
cell line
Organ
161
pancreas
81
kidney
53
epithelium
43
musculature of body
heart
32
limb
30
brain
20
connective tissue
18
blood
18
bodily fluid
18
ureter
7
eye
7
liver
7
spleen
7
vasculature
5
blood vessel
2
artery
1
adipose tissue
Project
381
AMP
Genome assembly (visualization)
367
GRCh38
347
hg19
Lab
381
AMP-T2D consortium
Audit category:
27
inconsistent ontology term
organ_slims!
heart
BIOSAMPLE
ASSAY
381 results
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Clear Filters
DNase-seq
total RNA-seq
ChIP-seq
single cell RNA-seq
tissue
islet of Langerhans
120
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 30 more…
primary cell
pancreatic beta cell
9
skeletal muscle satellite cell
8
mesenchymal stem cell
7
pancreatic alpha cell
7
pancreatic acinar cell
5
+ See 31 more…
cell line
GM12878
18
HepG2
5
See all biosamples
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