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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
422
ChIP-seq
5
total RNA-seq
Assay category
422
DNA binding
5
Transcription
Target of assay
255
transcription factor
92
histone
92
histone modification
72
control
66
recombinant protein
54
broad histone mark
40
RNA binding protein
38
narrow histone mark
21
chromatin remodeller
2
other context
2
other post-translational modification
Date released
667
February, 2021
397
November, 2017
352
August, 2017
315
August, 2021
280
October, 2019
194
May, 2020
193
May, 2021
163
June, 2019
120
July, 2018
117
February, 2023
115
May, 2019
94
December, 2017
87
November, 2018
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
63
March, 2020
61
November, 2019
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
10
November, 2020
8
January, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
413
bam
351
bigWig
345
fastq
328
bed narrowPeak
327
bigBed narrowPeak
78
tagAlign
64
bed broadPeak
58
bigBed broadPeak
5
tsv
3
tar
Organism
427
Homo sapiens
Biosample type
338
cell line
89
tissue
primary cell
Organ
320
liver
82
brain
18
blood
18
bodily fluid
7
spleen
Project
427
AMP
Genome assembly (visualization)
300
GRCh38
298
hg19
Lab
427
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
biosample_type!
primary cell
BIOSAMPLE
ASSAY
427 results
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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG2
315
5
GM12878
18
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
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