Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
10
MeRIP-seq
total RNA-seq
1
ATAC-seq
1
DNase-seq
Assay category
25
DNA binding
2
DNA accessibility
Target of assay
14
transcription factor
9
control
7
histone
7
histone modification
6
RNA binding protein
6
chromatin remodeller
5
nucleotide modification
4
broad histone mark
3
narrow histone mark
Date released
406
November, 2017
322
August, 2017
284
October, 2019
245
August, 2021
218
June, 2019
217
May, 2021
174
May, 2022
170
February, 2021
151
May, 2020
120
May, 2019
112
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
64
July, 2019
49
March, 2020
48
July, 2018
47
September, 2018
47
September, 2023
43
April, 2018
43
September, 2020
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
27
bam
25
fastq
23
bed narrowPeak
22
bigBed narrowPeak
22
bigWig
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
37
Homo sapiens
Biosample type
24
cell line
11
tissue
2
primary cell
Organ
18
blood
18
bodily fluid
10
pancreas
7
spleen
6
epithelium
2
connective tissue
Project
37
AMP
Genome assembly (visualization)
23
GRCh38
23
hg19
Lab
27
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
37 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
MeRIP-seq
ATAC-seq
DNase-seq
cell line
GM12878
18
EndoC_BH1
6
tissue
spleen
7
islet of Langerhans
4
primary cell
osteoblast
1
1
Download