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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
145
ChIP-seq
16
snATAC-seq
7
WGBS
6
RRBS
3
DNase-seq
1
FAIRE-seq
Assay category
145
DNA binding
20
DNA accessibility
13
DNA methylation
Target of assay
96
histone
96
histone modification
60
broad histone mark
48
control
36
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
214
August, 2021
200
May, 2022
170
February, 2023
162
August, 2017
147
February, 2021
134
May, 2020
126
November, 2017
123
May, 2021
107
October, 2019
56
September, 2020
48
March, 2020
47
September, 2023
29
July, 2019
29
October, 2018
25
February, 2020
24
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
16
January, 2021
10
November, 2020
9
November, 2018
9
October, 2017
8
February, 2018
8
January, 2018
8
June, 2019
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
3
March, 2019
3
May, 2023
1
August, 2018
1
August, 2022
1
September, 2018
Available data
68
tagAlign
38
fastq
33
bam
25
bigWig
24
bed narrowPeak
22
bed broadPeak
4
bed bedMethyl
4
bigBed bedMethyl
4
bigBed narrowPeak
2
bigBed broadPeak
Organism
177
Homo sapiens
Biosample type
134
tissue
25
primary cell
19
in vitro differentiated cells
Organ
60
connective tissue
44
pancreas
41
adipose tissue
35
liver
26
musculature of body
12
epithelium
8
blood
8
bodily fluid
Project
162
AMP
16
T1D
Genome assembly (visualization)
276
hg19
GRCh38
Lab
162
AMP-T2D consortium
16
Kyle Gaulton, UCSD
assembly!
GRCh38
BIOSAMPLE
ASSAY
178 results
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ChIP-seq
snATAC-seq
WGBS
RRBS
DNase-seq
FAIRE-seq
tissue
subcutaneous abdominal adipose tissue
36
3
liver
30
3
1
islet of Langerhans
21
4
1
skeletal muscle tissue
22
4
pancreas
2
4
+ See 2 more…
primary cell
peripheral blood mononuclear cell
8
pancreatic alpha cell
6
pancreatic beta cell
6
skeletal muscle myoblast
2
1
2
in vitro differentiated cells
adipocyte
19
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