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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
16
snATAC-seq
6
DNase-seq
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
23
DNA accessibility
21
DNA binding
1
Transcription
Target of assay
15
transcription factor
6
control
3
other context
3
other post-translational modification
2
RNA binding protein
2
chromatin remodeller
Date released
706
February, 2021
399
May, 2021
351
August, 2017
307
October, 2019
284
August, 2021
216
June, 2019
205
February, 2023
168
July, 2018
147
May, 2020
120
May, 2019
119
May, 2022
91
November, 2017
87
July, 2019
80
April, 2019
76
October, 2018
73
September, 2018
61
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
34
December, 2018
31
December, 2017
29
November, 2018
25
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
29
fastq
28
bam
22
bed narrowPeak
22
bigBed narrowPeak
22
bigWig
6
bed bed3+
6
bed broadPeak
6
bigBed broadPeak
1
csv
Organism
45
Homo sapiens
Biosample type
21
tissue
15
cell line
9
primary cell
Organ
liver
23
blood
23
bodily fluid
11
pancreas
7
spleen
2
brain
1
adipose tissue
1
connective tissue
Project
29
AMP
16
T1D
Genome assembly (visualization)
22
hg19
21
GRCh38
Lab
29
AMP-T2D consortium
16
Kyle Gaulton, UCSD
assay_title!
WGBS
organ_slims!
liver
BIOSAMPLE
ASSAY
45 results
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Clear Filters
ChIP-seq
snATAC-seq
DNase-seq
FAIRE-seq
single cell RNA-seq
tissue
spleen
6
1
pancreas
4
1
islet of Langerhans
4
body of pancreas
2
brain
2
+ See 1 more…
cell line
GM12878
15
primary cell
peripheral blood mononuclear cell
8
pancreatic cell
1
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