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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
snATAC-seq
7
ChIP-seq
7
WGBS
4
single cell RNA-seq
Assay category
16
DNA accessibility
7
DNA binding
7
DNA methylation
4
Transcription
Target of assay
6
control
1
recombinant protein
1
transcription factor
Date released
715
February, 2021
399
May, 2021
369
August, 2017
341
May, 2020
319
August, 2021
244
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
106
July, 2019
94
November, 2017
64
March, 2020
61
November, 2019
59
September, 2018
59
September, 2020
49
April, 2018
47
September, 2023
44
December, 2017
40
May, 2024
39
February, 2018
31
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
October, 2017
16
April, 2019
16
January, 2021
15
May, 2023
15
November, 2018
15
November, 2020
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
91
fastq
90
bam
83
bigWig
73
bed narrowPeak
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
3
tsv
1
csv
Organism
34
Homo sapiens
Biosample type
17
tissue
12
primary cell
5
cell line
Organ
13
pancreas
11
blood
11
bodily fluid
5
spleen
2
liver
1
epithelium
Project
18
AMP
16
T1D
Genome assembly (visualization)
10
GRCh38
3
hg19
Lab
18
AMP-T2D consortium
16
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
Audit category:
1
missing controlled_by
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
34 results
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Clear Filters
snATAC-seq
ChIP-seq
WGBS
single cell RNA-seq
tissue
pancreas
4
2
spleen
3
2
islet of Langerhans
4
body of pancreas
2
primary cell
peripheral blood mononuclear cell
8
pancreatic cell
2
pancreatic ductal cell
1
unclassified exocrine cell
1
cell line
GM12878
3
HepG2
1
1
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