Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
snATAC-seq
9
DNase-seq
7
WGBS
6
ChIP-seq
1
FAIRE-seq
single cell RNA-seq
Assay category
26
DNA accessibility
7
DNA methylation
6
DNA binding
Target of assay
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
692
February, 2021
383
May, 2021
364
August, 2017
341
May, 2020
307
October, 2019
214
June, 2019
204
February, 2023
202
August, 2021
166
May, 2022
162
November, 2017
120
July, 2018
115
May, 2019
105
July, 2019
74
April, 2019
72
September, 2018
64
March, 2020
61
October, 2018
60
November, 2019
52
December, 2017
39
February, 2018
25
February, 2020
23
November, 2018
23
October, 2017
19
September, 2020
16
January, 2019
16
January, 2021
16
November, 2020
12
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
7
December, 2018
7
December, 2019
6
April, 2018
5
March, 2019
5
March, 2023
4
October, 2022
1
August, 2018
1
August, 2022
Available data
23
bam
23
fastq
17
bigWig
10
bed narrowPeak
10
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
Organism
39
Homo sapiens
Biosample type
27
tissue
8
primary cell
4
cell line
Organ
15
pancreas
11
blood
11
bodily fluid
6
spleen
4
liver
2
brain
1
adipose tissue
1
connective tissue
Project
23
AMP
16
T1D
Genome assembly (visualization)
16
GRCh38
10
hg19
Lab
23
AMP-T2D consortium
16
Kyle Gaulton, UCSD
target.investigated_as!
transcription factor
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
39 results
search-icon
table-tab-icon
Clear Filters
snATAC-seq
DNase-seq
WGBS
ChIP-seq
FAIRE-seq
tissue
pancreas
4
2
1
spleen
1
2
3
body of pancreas
2
2
islet of Langerhans
4
brain
2
+ See 3 more…
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
3
HepG2
1
See all biosamples
Download