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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
209
total RNA-seq
176
ChIP-seq
9
WGBS
5
RRBS
2
ATAC-seq
2
DNase-seq
1
FAIRE-seq
Assay category
209
Transcription
176
DNA binding
14
DNA methylation
5
DNA accessibility
Target of assay
124
histone modification
123
histone
73
broad histone mark
50
narrow histone mark
29
control
23
transcription factor
2
RNA binding protein
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
294
bigWig
286
bam
205
tsv
177
fastq
66
bed narrowPeak
59
tagAlign
26
bed bed3+
26
bed broadPeak
22
bigBed narrowPeak
5
bed bedMethyl
5
bigBed bedMethyl
Organism
397
Homo sapiens
Biosample type
404
tissue
107
primary cell
68
in vitro differentiated cells
Organ
267
pancreas
57
adipose tissue
57
connective tissue
54
liver
26
musculature of body
Project
404
AMP
Genome assembly (visualization)
296
hg19
274
GRCh38
Lab
404
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
5
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
404 results
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Clear Filters
total RNA-seq
ChIP-seq
WGBS
RRBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
209
42
1
1
liver
48
3
1
subcutaneous abdominal adipose tissue
36
3
skeletal muscle tissue
22
4
pancreas
14
white adipose tissue
12
adipose tissue
2
3
right lobe of liver
1
1
subcutaneous adipose tissue
1
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