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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
single cell RNA-seq
8
snATAC-seq
Assay category
48
Transcription
8
DNA accessibility
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
34
October, 2019
31
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
0
November, 2019
Available data
48
bam
48
bigWig
48
fastq
48
tsv
Organism
56
Homo sapiens
Biosample type
168
tissue
56
primary cell
16
cell line
5
in vitro differentiated cells
Organ
37
pancreas
33
epithelium
8
blood
8
bodily fluid
2
connective tissue
Project
48
AMP
8
T1D
Genome assembly (visualization)
48
GRCh38
48
hg19
Lab
48
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
56 results
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Clear Filters
single cell RNA-seq
snATAC-seq
primary cell
pancreatic beta cell
9
peripheral blood mononuclear cell
8
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
pancreatic ductal cell
3
pancreatic polypeptide-secreting cell
3
co-expressing pancreatic endocrine cell
2
endothelial cell
2
mast cell
2
pancreatic epsilon cell
2
pancreatic stellate cell
2
unclassified pancreatic endocrine cell
2
mesenchymal cell
1
unclassified exocrine cell
1
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