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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
total RNA-seq
42
single cell RNA-seq
15
ChIP-seq
8
ATAC-seq
Assay category
162
Transcription
15
DNA binding
8
DNA accessibility
Target of assay
12
histone
12
histone modification
10
broad histone mark
3
control
2
narrow histone mark
Date released
587
February, 2021
411
August, 2017
406
November, 2017
333
May, 2020
316
August, 2021
309
May, 2021
291
October, 2019
200
May, 2022
194
February, 2023
192
June, 2019
162
July, 2018
117
May, 2019
106
July, 2019
90
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
49
April, 2018
47
March, 2020
47
September, 2023
39
February, 2018
39
November, 2019
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
November, 2020
8
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
2
June, 2018
1
August, 2022
Available data
173
bam
172
bigWig
158
tsv
61
fastq
14
tagAlign
12
bed narrowPeak
6
bigBed narrowPeak
4
bed broadPeak
Organism
185
Homo sapiens
Biosample type
143
tissue
42
primary cell
Organ
157
pancreas
32
epithelium
16
brain
3
connective tissue
1
adipose tissue
1
spleen
Project
185
AMP
Genome assembly (visualization)
172
GRCh38
171
hg19
Lab
184
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
inconsistent ontology term
Audit category:
4
missing controlled_by
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
185 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ChIP-seq
ATAC-seq
tissue
islet of Langerhans
120
1
brain
15
body of pancreas
4
cerebellum (Hemisphere)
1
omental fat pad
1
+ See 1 more…
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
4
pancreatic delta cell
4
pancreatic cell
3
+ See 7 more…
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