Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
single cell RNA-seq
41
WGBS
39
ATAC-seq
21
snATAC-seq
Assay category
81
Transcription
60
DNA accessibility
41
DNA methylation
Date released
359
May, 2021
324
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
90
August, 2021
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
31
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
Available data
134
zippedFastqFolder
48
bam
48
bigWig
48
fastq
48
tsv
Organism
182
Homo sapiens
Biosample type
tissue
182
primary cell
Organ
117
pancreas
113
epithelium
2
connective tissue
Project
134
HPAP
48
AMP
Genome assembly (visualization)
48
GRCh38
48
hg19
Lab
134
Klaus Kaestner, Upenn
48
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
biosample_type!
tissue
month_released!
September, 2018
BIOSAMPLE
ASSAY
182 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
WGBS
ATAC-seq
snATAC-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
7
25
22
pancreatic beta cell
9
16
13
pancreatic acinar cell
5
4
pancreatic delta cell
4
+ See 11 more…
See all biosamples
Download