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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
324
ChIP-seq
11
single cell RNA-seq
Assay category
324
DNA binding
11
Transcription
Target of assay
244
transcription factor
66
recombinant protein
59
control
37
RNA binding protein
18
histone
18
histone modification
15
chromatin remodeller
10
narrow histone mark
8
broad histone mark
2
other context
2
other post-translational modification
Date released
335
May, 2021
324
November, 2017
148
May, 2020
138
February, 2021
88
August, 2021
86
August, 2017
72
February, 2023
62
November, 2018
57
October, 2019
55
June, 2019
54
May, 2022
46
December, 2017
40
September, 2020
39
February, 2018
31
July, 2019
28
December, 2018
23
January, 2019
19
March, 2020
11
July, 2018
10
April, 2018
8
January, 2021
7
December, 2019
6
January, 2018
6
November, 2020
5
March, 2023
5
May, 2019
5
November, 2019
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
335
fastq
334
bam
288
bigWig
255
bed narrowPeak
255
bigBed narrowPeak
64
bed broadPeak
64
bigBed broadPeak
12
tagAlign
11
tsv
3
tar
Organism
335
Homo sapiens
Biosample type
315
cell line
tissue
20
primary cell
Organ
315
liver
39
epithelium
pancreas
9
brain
6
vasculature
3
blood vessel
2
connective tissue
Project
335
AMP
Genome assembly (visualization)
286
hg19
234
GRCh38
Lab
335
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
biosample_type!
tissue
organ_slims!
pancreas
BIOSAMPLE
ASSAY
335 results
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Clear Filters
ChIP-seq
single cell RNA-seq
cell line
HepG2
315
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
pancreatic cell
3
endothelial cell
2
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