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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
160
total RNA-seq
51
single cell RNA-seq
18
small RNA-seq
9
WGBS
6
ATAC-seq
2
FAIRE-seq
Assay category
229
Transcription
9
DNA methylation
8
DNA accessibility
Target of assay
3
control
Date released
572
February, 2021
392
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
250
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
249
bigWig
246
bam
229
tsv
50
fastq
23
bed bedMethyl
23
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
246
Homo sapiens
Biosample type
180
tissue
66
primary cell
Organ
157
pancreas
38
epithelium
21
heart
18
connective tissue
13
brain
12
adipose tissue
9
blood vessel
9
vasculature
7
kidney
7
liver
5
musculature of body
3
artery
1
limb
1
pericardium
Project
246
AMP
Genome assembly (visualization)
243
GRCh38
236
hg19
Lab
246
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
246 results
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Clear Filters
total RNA-seq
single cell RNA-seq
small RNA-seq
WGBS
ATAC-seq
FAIRE-seq
tissue
islet of Langerhans
116
heart left ventricle
2
2
2
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
+ See 22 more…
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
+ See 25 more…
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