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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
146
total RNA-seq
49
single cell RNA-seq
38
ATAC-seq
1
snATAC-seq
Assay category
195
Transcription
39
DNA accessibility
Date released
670
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
168
July, 2018
129
February, 2023
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
April, 2019
76
October, 2018
73
September, 2018
66
May, 2022
64
March, 2020
61
November, 2019
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
3
June, 2018
1
August, 2022
1
October, 2022
Available data
188
bam
184
bigWig
164
tsv
74
fastq
38
bed narrowPeak
7
txt
1
bed bed3+
Organism
234
Homo sapiens
Biosample type
186
tissue
48
primary cell
Organ
181
pancreas
40
liver
33
epithelium
2
connective tissue
2
musculature of body
Project
234
AMP
HPAP
Genome assembly (visualization)
203
hg19
164
GRCh38
Lab
170
AMP-T2D consortium
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
Audit category:
6
inconsistent ontology term
1
audit script error
month_released!
April, 2019
award.project!
HPAP
BIOSAMPLE
ASSAY
234 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ATAC-seq
snATAC-seq
tissue
islet of Langerhans
126
18
liver
20
20
skeletal muscle tissue
1
1
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
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