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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
total RNA-seq
48
single cell RNA-seq
31
ChIP-seq
Assay category
187
DNA accessibility
48
Transcription
31
DNA binding
Target of assay
19
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
406
November, 2017
322
August, 2017
284
October, 2019
245
August, 2021
218
June, 2019
217
May, 2021
174
May, 2022
170
February, 2021
151
May, 2020
120
May, 2019
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
64
July, 2019
49
March, 2020
48
July, 2018
47
September, 2018
47
September, 2023
43
April, 2018
43
September, 2020
41
November, 2019
40
May, 2024
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
266
bam
258
bigWig
210
bed narrowPeak
210
bigBed narrowPeak
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
48
fastq
48
tsv
Organism
266
Homo sapiens
Biosample type
163
tissue
103
primary cell
Organ
81
kidney
53
epithelium
43
musculature of body
41
pancreas
35
heart
32
limb
30
brain
20
connective tissue
18
ureter
7
eye
7
vasculature
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
266
AMP
Genome assembly (visualization)
258
GRCh38
235
hg19
Lab
266
AMP-T2D consortium
Audit category:
32
inconsistent ontology term
month_released!
February, 2023
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
266 results
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Clear Filters
DNase-seq
single cell RNA-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 34 more…
primary cell
pancreatic beta cell
9
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
pancreatic alpha cell
7
+ See 32 more…
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