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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
147
total RNA-seq
88
ATAC-seq
85
single cell RNA-seq
41
WGBS
22
snATAC-seq
Assay category
232
Transcription
110
DNA accessibility
41
DNA methylation
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
188
bam
184
bigWig
164
tsv
134
zippedFastqFolder
74
fastq
38
bed narrowPeak
7
txt
1
bed bed3+
Organism
383
Homo sapiens
Biosample type
201
tissue
182
primary cell
Organ
261
pancreas
113
epithelium
40
liver
14
kidney
3
connective tissue
2
musculature of body
1
adipose tissue
Project
249
AMP
134
HPAP
Genome assembly (visualization)
204
hg19
176
GRCh38
Lab
171
AMP-T2D consortium
134
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
14
Katalin Susztak, Upenn
Audit category:
6
inconsistent ontology term
1
audit script error
month_released!
February, 2023
BIOSAMPLE
ASSAY
383 results
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Clear Filters
total RNA-seq
ATAC-seq
single cell RNA-seq
WGBS
snATAC-seq
tissue
islet of Langerhans
126
18
liver
20
20
kidney
11
3
skeletal muscle tissue
1
1
adipose tissue
1
primary cell
Langerhans cell
33
21
pancreatic alpha cell
22
7
25
pancreatic beta cell
13
9
16
pancreatic acinar cell
4
5
pancreatic delta cell
4
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