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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
302
total RNA-seq
48
single cell RNA-seq
Assay category
350
Transcription
165
DNA binding
34
DNA accessibility
1
DNA methylation
Date released
563
February, 2021
190
May, 2020
182
May, 2021
180
August, 2021
168
July, 2018
94
February, 2023
89
August, 2017
65
July, 2019
60
May, 2022
56
September, 2020
49
April, 2018
47
September, 2023
30
October, 2019
27
September, 2018
25
February, 2020
20
November, 2019
15
February, 2018
15
March, 2020
9
April, 2020
8
December, 2019
5
January, 2019
4
March, 2023
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
339
bigWig
337
bam
337
tsv
50
fastq
2
bed bed3+
Organism
350
Homo sapiens
Biosample type
159
tissue
103
primary cell
84
in vitro differentiated cells
4
cell line
Organ
198
pancreas
39
epithelium
3
connective tissue
3
heart
2
embryo
Project
299
AMP
51
T1D
Genome assembly (visualization)
339
hg19
337
GRCh38
Lab
291
AMP-T2D consortium
59
Kyle Gaulton, UCSD
Audit category:
75
inconsistent ontology term
BIOSAMPLE
ASSAY
350 results
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total RNA-seq
single cell RNA-seq
tissue
islet of Langerhans
156
cardiac atrium
1
cardiac ventricle
1
pancreas
1
primary cell
monocyte
52
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
+ See 13 more…
in vitro differentiated cells
cardiomyocytes
59
induced pluripotent stem cell
9
embryonic stem cell
5
cardiac fibroblast
1
cardiomyocytes (cardiac muscle cell)
1
+ See 9 more…
cell line
EndoC_BH1
4
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