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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
total RNA-seq
93
ChIP-seq
48
single cell RNA-seq
Assay category
168
Transcription
93
DNA binding
Target of assay
71
control
14
histone
14
histone modification
9
narrow histone mark
8
transcription factor
5
broad histone mark
2
RNA binding protein
Date released
692
February, 2021
314
May, 2020
269
August, 2017
266
May, 2021
213
August, 2021
168
July, 2018
162
May, 2022
140
February, 2023
125
October, 2019
101
July, 2019
93
November, 2017
61
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
31
October, 2018
27
September, 2018
25
February, 2020
24
November, 2019
23
February, 2018
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
15
November, 2018
14
November, 2020
11
October, 2017
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
556
bam
498
bigWig
374
fastq
bed narrowPeak
312
bigBed narrowPeak
164
tsv
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
261
Homo sapiens
Biosample type
144
tissue
66
cell line
51
primary cell
Organ
157
pancreas
66
liver
35
epithelium
27
brain
2
connective tissue
2
vasculature
1
blood vessel
Project
261
AMP
Genome assembly (visualization)
186
hg19
164
GRCh38
Lab
261
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
2
inconsistent control read length
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
261 results
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Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
tissue
islet of Langerhans
120
cingulate gyrus
7
layer of hippocampus
6
substantia nigra
4
caudate nucleus
3
+ See 2 more…
cell line
HepG2
66
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
+ See 13 more…
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