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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
total RNA-seq
49
single cell RNA-seq
7
ChIP-seq
7
WGBS
Assay category
169
Transcription
7
DNA binding
7
DNA methylation
Target of assay
6
control
1
recombinant protein
1
transcription factor
Date released
715
February, 2021
399
May, 2021
369
August, 2017
341
May, 2020
319
August, 2021
244
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
106
July, 2019
94
November, 2017
64
March, 2020
61
November, 2019
59
September, 2018
59
September, 2020
49
April, 2018
47
September, 2023
44
December, 2017
39
February, 2018
31
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
October, 2017
16
April, 2019
16
January, 2021
15
May, 2023
15
November, 2018
15
November, 2020
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
251
bam
244
bigWig
164
tsv
138
fastq
73
bed narrowPeak
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
183
Homo sapiens
Biosample type
129
tissue
49
primary cell
5
cell line
Organ
161
pancreas
33
epithelium
5
spleen
3
blood
3
bodily fluid
2
connective tissue
2
liver
Project
183
AMP
Genome assembly (visualization)
171
GRCh38
164
hg19
Lab
183
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
1
missing controlled_by
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
183 results
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total RNA-seq
single cell RNA-seq
ChIP-seq
WGBS
tissue
islet of Langerhans
120
spleen
3
2
body of pancreas
2
pancreas
2
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic cell
4
pancreatic delta cell
4
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cell line
GM12878
3
HepG2
1
1
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